Survival-associated eQTLs across different cancer types
We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
log-rank test p-value
|
Sample size
|
Median survival time AA
|
Median survival time Aa
|
Median survival time aa
|
|
---|---|---|---|---|---|---|---|---|---|
KIRP | rs766342 | chr1:212693134 | C/A | 4.43E-7 | 214 | 15.2 | 22.15 | 10.63 | KM Plot |
KIRP | rs76671935 | chr14:23717587 | C/T | 0.000359 | 204 | 14.53 | 17.62 | 17.13 | KM Plot |
KIRP | rs76700295 | chr11:34865160 | A/G | 0 | 213 | 15.88 | 16.43 | 3.83 | KM Plot |
KIRP | rs76724542 | chr14:59891607 | C/T | 0.000111 | 213 | 16.43 | 16.53 | 6.63 | KM Plot |
KIRP | rs76729011 | chr1:48737387 | C/A | 3.49E-7 | 213 | 14.85 | 19.87 | 11.03 | KM Plot |
KIRP | rs76733198 | chr19:42570571 | A/C | 0.000314 | 214 | 15.1 | 17 | 11.2 | KM Plot |
KIRP | rs76754991 | chr22:18089899 | A/T | 4.24E-5 | 214 | 16.43 | 20.27 | 10.55 | KM Plot |
KIRP | rs76876269 | chr17:80795682 | C/T | 9.36E-5 | 211 | 15.33 | 17.6 | 15.15 | KM Plot |
KIRP | rs76899909 | chr14:73987491 | G/A | 0 | 206 | 17 | 13.1 | 2.03 | KM Plot |
KIRP | rs76922158 | chr17:80839410 | C/T | 0.00011 | 210 | 15.1 | 17.2 | 13.17 | KM Plot |
KIRP | rs76951447 | chr16:20445884 | C/T | 0.000368 | 213 | 16.47 | 13.6 | 1.73 | KM Plot |
KIRP | rs76953117 | chr17:77867440 | A/G | 0.000456 | 208 | 15.07 | 19.9 | 6.05 | KM Plot |
KIRP | rs76972441 | chr17:45318245 | TCAATATTTG/T | 1.66E-11 | 213 | 14.53 | 24.9 | 0.43 | KM Plot |
KIRP | rs76995884 | chr10:102012078 | G/A | 6.35E-6 | 213 | 16.43 | 22.77 | 3.6 | KM Plot |
KIRP | rs77017987 | chr17:80756658 | C/A | 9.94E-5 | 209 | 15.33 | 17.6 | 15.15 | KM Plot |